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Marco Chierici

Researcher
  • Phone: 0461314578
  • FBK Povo
Short bio

Marco Chierici is a research scientist at FBK with a Ph.D. in Bioengineering. He is expert on bioinformatic tools for the analysis of high-throughput biological data, as well as on scientific programming with R and Python. Among his research interests is the application of artificial intelligence methods (i.e., deep learning) to computational biology. At MPBA he has been responsible of next-generation sequencing bioinformatic pipelines since 2008, also developing methods for reproducibility of analyses. He was scientific chief instructor of WebValley 2009 and 2014.

Publications
  1. C. Wang; B. Gong; P.R. Bushel; J. Thierry-Mieg; D. Thierry-Mieg; J. Xu; H. Fang; H. Hong; J. Shen; Z. Su; J. Meehan; X. Li; L. Yang; H. Li; P.P. Labaj; D.P. Krell; D. Megherbi; S. Gaj; F. Calment; J. van Delft; J. Kleinjans; A. Sherer; V. Devanarayan; J. Wang; Y. Yang; H.-R. Qian; L.J. Lancashire; M. Bessarabova; Y. Nikolsky; C. Furlanello; M. Chierici; D. Albanese; G. Jurman; S. Riccadonna; M. Filosi; R. Visintainer; K.K. Zhang; J. Li; J.-H. Hsieh; D.L Svoboda; J.C. Fuscoe; Y. Deng; L. Shi; R.S. Paules; S.S. Auerbach; W. Tong,
    The concordance between RNA-Seq and microarray data depends on chemical treatment and transcript abundance,
    in «NATURE BIOTECHNOLOGY»,
    vol. 32,
    n. 9,
    2014
    , pp. 926 -
    932
  2. P.E. Corneo; A. Pellegrini; L. Cappellin; M. Roncador; M. Chierici; C. Gessler; I. Pertot,
    Microbial community structure in vineyard soils across altitudinal gradients and in different seasons.,
    in «FEMS MICROBIOLOGY ECOLOGY»,
    vol. 84,
    n. 3,
    2013
    , pp. 588 -
    602
  3. M. Chierici; D. Albanese; P. Franceschi; C. Furlanello,
    TOFwave: Reproducibility in Biomarker Discovery from time-of-flight Mass Spectrometry Data.,
    in «MOLECULAR BIOSYSTEMS»,
    2012
  4. M. Chierici; K. Miclaus; S. Vega; C. Furlanello,
    An interactive effect of batch size and composition contributes to discordant results in GWAS with the CHIAMO genotyping algorithm.,
    in «PHARMACOGENOMICS JOURNAL»,
    vol. 10,
    2010
    , pp. 355 -
    363
  5. H. Hong; L. Shi; Z. Su; W. Ge; W. Jones; W. Czika; K. Miclaus; C. Lambert; S. Vega; J. Zhang; B. Ning; J. Liu; B. Green; L. Xu; H. Fang; R. Perkins; S. Lin; N. Jafari; K. Park; T. Ahn; M. Chierici; C. Furlanello; L. Zhang; R. Wolfinger; F. Goodsaid; W. Tong,
    Assessing sources of inconsistencies in genotypes and their effects on genome-wide association studies with HapMap samples.,
    in «PHARMACOGENOMICS JOURNAL»,
    vol. 10,
    2010
    , pp. 364 -
    374
  6. L. Zhang; S. Yin; K. Miclaus; M. Chierici; S. Vega; C. Lambert; H. Hong; R. Wolfinger; C. Furlanello; F. Goodsaid,
    Assessment of variability in GWAS with CRLMM genotyping algorithm on WTCCC Coronary Artery Disease.,
    in «PHARMACOGENOMICS JOURNAL»,
    vol. 10,
    2010
    , pp. 347 -
    354
  7. K. Miclaus; M. Chierici; C. Lambert; L. Zhang; S. Vega; H. Hong; S. Yin; C. Furlanello; R. Wolfinger; F. Goodsaid,
    Variability in GWAS Analysis: the Impact of Genotype Calling Algorithm Inconsistencies.,
    in «PHARMACOGENOMICS JOURNAL»,
    vol. 10,
    2010
    , pp. 324 -
    335
  8. K. Miclaus; R. Wolfinger; S. Vega; M. Chierici; C. Furlanello; C. Lambert; H. Hong; L. Zhang; S. Yin; F. Goodsaid,
    Batch Effects in the BRLMM Genotype Calling Algorithm Influence GWAS Results for the Affymetrix 500K Array.,
    in «PHARMACOGENOMICS JOURNAL»,
    vol. 10,
    2010
    , pp. 336 -
    346
  9. Gianluigi Pillonetto; Giuseppe De Nicolao; Marco Chierici; Claudio Cobelli,
    Fast algorithms for nonparametric population modeling of large data sets,
    in «AUTOMATICA»,
    vol. 45,
    2009
    , pp. 173 -
    179
  10. A. Barla; G. Jurman; S. Riccadonna; M. Chierici; S. Merler; C. Furlanello,
    in «BRIEFINGS IN BIOINFORMATICS»,
    vol. 9,
    n. 2,
    2008
    , pp. 119 -
    128

Pages